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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7742691 chr6:86278691 T/C SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs7752502 chr6:86410651 C/T SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs7755996 chr6:86423720 C/T SNHG5 chr6:86370668-86388454:- 0.64 5.24 2.98E-6 Box Plot
ACC rs7757864 chr6:86381361 G/A SNHG5 chr6:86370668-86388454:- 0.7 6.29 6.69E-8 Box Plot
ACC rs7760250 chr6:42929839 G/A PEX6 chr6:42931608-42946958:- 0.59 5.54 1.01E-6 Box Plot
ACC rs7761762 chr6:86205968 C/A SNHG5 chr6:86370668-86388454:- 0.68 6.59 2.2E-8 Box Plot
ACC rs7762321 chr6:86412146 A/G SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs7766485 chr6:86263555 T/C SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs7768065 chr6:86258557 T/C SNHG5 chr6:86370668-86388454:- 0.68 5.29 2.52E-6 Box Plot
ACC rs77703160 chr8:71651134 C/A XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs7771612 chr6:86264374 T/G SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs7775864 chr6:86247759 T/C SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs777587 chr2:61427675 A/G C2orf74 chr2:61372203-61391964:+ 0.62 6.69 1.56E-8 Box Plot
ACC rs7780100 chr7:64442904 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs778140 chr2:61682976 C/T C2orf74 chr2:61372203-61391964:+ 0.59 5.76 4.58E-7 Box Plot